Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | AJAP_RS00615 | Not Available | + | 125467 - 125808 | 13420.1 |
| helix-turn-helix domain-containing protein | AJAP_RS00620 | Not Available | + | 125826 - 126125 | 11027.4 |
| hypothetical protein | AJAP_RS00625 | Not Available | + | 126195 - 126701 | 17861.4 |
| hypothetical protein | AJAP_RS00630 | Not Available | + | 126777 - 127385 | 23343.9 |
| duf2716 domain-containing protein | AJAP_RS00635 | Not Available | + | 127573 - 128112 | 20599.2 |
| immunity 7 family protein | AJAP_RS00640 | Not Available | + | 128151 - 128552 | 14837.4 |
| Trna-gly | Not Available | Not Available | + | 128823 - 128895 | Not Available |
| sigma-70 family rna polymerase sigma factor | AJAP_RS00650 | Not Available | + | 129093 - 130649 | 53971.7 |
| hypothetical protein | AJAP_RS00655 | Not Available | + | 130755 - 131195 | 16353.9 |
| fpg/nei family dna glycosylase | AJAP_RS00660 | Not Available | + | 131228 - 132091 | 30901.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.