Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf6177 family protein | AJAP_RS08540 | Not Available | - | 1741085 - 1742059 | 33753.2 |
| hypothetical protein | AJAP_RS08545 | Not Available | - | 1742044 - 1742400 | 12950.3 |
| sensor histidine kinase | AJAP_RS08550 | Not Available | - | 1742409 - 1743662 | 43804.6 |
| response regulator transcription factor | AJAP_RS08555 | Not Available | - | 1743659 - 1744324 | 24931.3 |
| helix-turn-helix transcriptional regulator | AJAP_RS08560 | Not Available | + | 1744484 - 1745137 | 22736.6 |
| right-handed parallel beta-helix repeat-containing protein | AJAP_RS08565 | Not Available | + | 1745137 - 1746786 | 56767.4 |
| response regulator transcription factor | AJAP_RS08570 | Not Available | + | 1746796 - 1747461 | 24555.9 |
| hypothetical protein | AJAP_RS08575 | Not Available | + | 1747570 - 1747962 | 14477.1 |
| iclr family transcriptional regulator | AJAP_RS08580 | Not Available | - | 1748027 - 1748728 | 24496.4 |
| 3-isopropylmalate dehydratase large subunit | AJAP_RS08585 | Not Available | + | 1748808 - 1750226 | 50780.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.