Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AJAP_RS08490 | Not Available | - | 1720306 - 1721637 | 45187.1 |
| hypothetical protein | AJAP_RS08495 | Not Available | - | 1721655 - 1722038 | 13355.7 |
| type vii secretion protein eccc | AJAP_RS08500 | Not Available | - | 1722134 - 1726108 | 143339.0 |
| hypothetical protein | AJAP_RS08505 | Not Available | + | 1726243 - 1726578 | 11430.2 |
| hypothetical protein | AJAP_RS08510 | Not Available | + | 1726591 - 1726905 | 11175.6 |
| type vii secretion-associated serine protease mycosin | AJAP_RS08515 | Not Available | - | 1726976 - 1728262 | 44392.0 |
| ybab/ebfc family nucleoid-associated protein | AJAP_RS08520 | Not Available | + | 1728381 - 1728758 | 13945.5 |
| hypothetical protein | AJAP_RS08525 | Not Available | + | 1728755 - 1729081 | 11281.2 |
| toxin glutamine deamidase domain-containing protein | AJAP_RS08530 | Not Available | + | 1729097 - 1738804 | 342167.0 |
| yrhb domain-containing protein | AJAP_RS08535 | Not Available | + | 1738807 - 1741038 | 78961.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.