Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vii secretion protein ecce | AJAP_RS08440 | Not Available | - | 1706374 - 1707693 | 46301.0 |
| fibronectin type iii domain-containing protein | AJAP_RS08445 | Not Available | + | 1707822 - 1709951 | 72203.1 |
| aaa family atpase | AJAP_RS08450 | Not Available | + | 1709948 - 1710901 | 34385.5 |
| duf58 domain-containing protein | AJAP_RS08455 | Not Available | + | 1710904 - 1712031 | 39916.6 |
| transglutaminasetgpa domain-containing protein | AJAP_RS08460 | Not Available | + | 1712028 - 1714199 | 76833.3 |
| serine/threonine protein kinase | AJAP_RS08465 | Not Available | - | 1714260 - 1715663 | 49450.1 |
| type vii secretion integral membrane protein eccd | AJAP_RS08470 | Not Available | + | 1715766 - 1717148 | 46827.8 |
| type vii secretion protein eccb | AJAP_RS08475 | Not Available | + | 1717153 - 1718586 | 49712.5 |
| hypothetical protein | AJAP_RS08480 | Not Available | - | 1718660 - 1719868 | 40442.6 |
| hypothetical protein | AJAP_RS08485 | Not Available | - | 1719879 - 1720295 | 13745.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.