Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AJAP_RS08400 | Not Available | - | 1700866 - 1701198 | 12233.3 |
| sigb/sigf/sigg family rna polymerase sigma factor | AJAP_RS08405 | Not Available | + | 1701436 - 1702224 | 29748.8 |
| decarboxylase | AJAP_RS08410 | Not Available | - | 1702214 - 1702945 | 26040.7 |
| duf6292 family protein | AJAP_RS08415 | Not Available | - | 1702999 - 1703373 | 13674.1 |
| hsp20/alpha crystallin family protein | AJAP_RS08420 | Not Available | - | 1703454 - 1703894 | 16210.5 |
| hypothetical protein | AJAP_RS08425 | Not Available | + | 1704001 - 1704615 | 22176.0 |
| hypothetical protein | AJAP_RS44260 | Not Available | + | 1704623 - 1704763 | 4716.91 |
| hypothetical protein | AJAP_RS45045 | Not Available | - | 1704870 - 1704995 | 4287.85 |
| nucleotidyltransferase domain-containing protein | AJAP_RS08430 | Not Available | - | 1705078 - 1705818 | 26745.6 |
| tspo/mbr family protein | AJAP_RS08435 | Not Available | + | 1705905 - 1706381 | 16771.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.