Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent cysteine synthase family protein | AJAP_RS08350 | Not Available | + | 1690973 - 1692031 | 37060.3 |
| mate family efflux transporter | AJAP_RS08355 | Not Available | + | 1692028 - 1693410 | 47633.1 |
| hypothetical protein | AJAP_RS08360 | Not Available | - | 1693386 - 1694327 | 33706.1 |
| fur family transcriptional regulator | AJAP_RS08365 | Not Available | + | 1694454 - 1694876 | 15072.0 |
| catalase/peroxidase hpi | AJAP_RS08370 | Not Available | + | 1694904 - 1697138 | 81605.2 |
| gaf and antar domain-containing protein | AJAP_RS08375 | Not Available | - | 1697247 - 1698029 | 27696.6 |
| voc family protein | AJAP_RS08380 | Not Available | - | 1698107 - 1698490 | 13718.3 |
| hemerythrin domain-containing protein | AJAP_RS08385 | Not Available | + | 1698572 - 1699123 | 20444.1 |
| stas domain-containing protein | AJAP_RS08390 | Not Available | + | 1699168 - 1699512 | 11797.1 |
| ydcf family protein | AJAP_RS45195 | Not Available | - | 1699509 - 1700854 | 47710.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.