Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydrogenase | AJAP_RS08220 | Not Available | + | 1662822 - 1663865 | 36874.9 |
| citramalate synthase | AJAP_RS08225 | Not Available | + | 1664151 - 1665776 | 57561.0 |
| fumarylacetoacetate hydrolase family protein | AJAP_RS08230 | Not Available | + | 1665796 - 1666566 | 27110.5 |
| fad-dependent oxidoreductase | AJAP_RS08235 | Not Available | - | 1666632 - 1667867 | 45342.5 |
| had family hydrolase | AJAP_RS08240 | Not Available | + | 1668420 - 1669154 | 26409.6 |
| Trna-gln | Not Available | Not Available | + | 1669206 - 1669277 | Not Available |
| Trna-glu | Not Available | Not Available | + | 1669409 - 1669481 | Not Available |
| hypothetical protein | AJAP_RS44045 | Not Available | - | 1669721 - 1669885 | 5217.24 |
| hypothetical protein | AJAP_RS44050 | Not Available | - | 1669882 - 1670031 | 5582.7 |
| hypothetical protein | AJAP_RS08255 | Not Available | - | 1670022 - 1670684 | 24815.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.