Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 4 protein | AJAP_RS07970 | Not Available | - | 1608640 - 1609893 | 45424.4 |
| ydcf family protein | AJAP_RS07975 | Not Available | + | 1610015 - 1611235 | 41122.0 |
| hypothetical protein | AJAP_RS07980 | Not Available | - | 1611223 - 1611450 | 7678.88 |
| serine protease | AJAP_RS07985 | Not Available | - | 1611450 - 1612511 | 37221.5 |
| glutathione peroxidase | AJAP_RS07990 | Not Available | - | 1612795 - 1613280 | 17360.4 |
| glycoside hydrolase family 57 protein | AJAP_RS07995 | Not Available | - | 1613294 - 1614805 | 55908.9 |
| class i sam-dependent methyltransferase | AJAP_RS08000 | Not Available | - | 1614802 - 1615575 | 27787.1 |
| hypothetical protein | AJAP_RS08005 | Not Available | + | 1615646 - 1616068 | 15136.8 |
| degv family protein | AJAP_RS08010 | Not Available | - | 1616049 - 1616900 | 29928.0 |
| electron transfer flavoprotein subunit beta/fixa family protein | AJAP_RS08015 | Not Available | + | 1617144 - 1617929 | 27130.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.