Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nlpc/p60 family protein | AJAP_RS07920 | Not Available | - | 1597495 - 1598622 | 39280.4 |
| nucleoside hydrolase | AJAP_RS07925 | Not Available | - | 1598622 - 1599581 | 33550.3 |
| acyltransferase | AJAP_RS07930 | Not Available | + | 1599635 - 1600393 | 28229.3 |
| nadar family protein | AJAP_RS07935 | Not Available | - | 1600390 - 1600956 | 21246.1 |
| threonine ammonia-lyase ilva | AJAP_RS07940 | Not Available | + | 1601052 - 1602308 | 44291.0 |
| nad(p)h-binding protein | AJAP_RS07945 | Not Available | - | 1602379 - 1603203 | 29004.7 |
| short-chain fatty acyl-coa regulator family protein | AJAP_RS07950 | Not Available | - | 1603281 - 1604708 | 52408.4 |
| isocitrate lyase | AJAP_RS07955 | Not Available | + | 1604937 - 1606223 | 47167.2 |
| malate synthase a | AJAP_RS07960 | Not Available | + | 1606326 - 1607930 | 59443.6 |
| hypothetical protein | AJAP_RS45040 | Not Available | + | 1608333 - 1608464 | 4410.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.