Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | AJAP_RS07820 | Not Available | - | 1579571 - 1580179 | 21632.2 |
| doxx family protein | AJAP_RS07825 | Not Available | + | 1580312 - 1580659 | 11935.0 |
| voc family protein | AJAP_RS07830 | Not Available | - | 1580662 - 1581003 | 11964.7 |
| transcriptional repressor lexa | AJAP_RS07835 | Not Available | - | 1581041 - 1581697 | 23813.3 |
| nuclear transport factor 2 family protein | AJAP_RS07840 | Not Available | - | 1581675 - 1582136 | 16764.8 |
| hypothetical protein | AJAP_RS07845 | Not Available | + | 1582265 - 1582699 | 14969.8 |
| marr family winged helix-turn-helix transcriptional regulator | AJAP_RS07850 | Not Available | - | 1582701 - 1583138 | 15476.8 |
| helix-turn-helix domain-containing protein | AJAP_RS07855 | Not Available | - | 1583146 - 1584000 | 31578.8 |
| mbl fold metallo-hydrolase | AJAP_RS07860 | Not Available | + | 1584103 - 1585008 | 33237.7 |
| carboxylesterase/lipase family protein | AJAP_RS07865 | Not Available | + | 1585018 - 1586283 | 43992.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.