Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | AJAP_RS07620 | Not Available | - | 1543055 - 1544101 | 37425.8 |
| hypothetical protein | AJAP_RS07625 | Not Available | + | 1544173 - 1544652 | 17229.2 |
| abc transporter substrate-binding protein | AJAP_RS07630 | Not Available | - | 1544905 - 1545894 | 33560.8 |
| abc transporter permease | AJAP_RS07635 | Not Available | - | 1545923 - 1546984 | 36634.2 |
| atp-binding cassette domain-containing protein | AJAP_RS07640 | Not Available | - | 1546981 - 1547745 | 27075.0 |
| class i mannose-6-phosphate isomerase | AJAP_RS07645 | Not Available | - | 1547742 - 1548797 | 37898.4 |
| laci family dna-binding transcriptional regulator | AJAP_RS07650 | Not Available | - | 1548794 - 1549780 | 35127.1 |
| gh92 family glycosyl hydrolase | AJAP_RS07655 | Not Available | + | 1550044 - 1552431 | 85921.0 |
| duf3817 domain-containing protein | AJAP_RS07660 | Not Available | + | 1552635 - 1553003 | 12857.2 |
| marr family winged helix-turn-helix transcriptional regulator | AJAP_RS07665 | Not Available | - | 1553074 - 1553574 | 18428.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.