Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AJAP_RS07570 | Not Available | - | 1533983 - 1534570 | 22961.4 |
| peptidylprolyl isomerase | AJAP_RS07575 | Not Available | + | 1534717 - 1535397 | 23934.4 |
| plp-dependent aminotransferase family protein | AJAP_RS07580 | Not Available | - | 1535482 - 1536861 | 49283.9 |
| carboxymuconolactone decarboxylase family protein | AJAP_RS07585 | Not Available | + | 1536908 - 1537372 | 17564.9 |
| isocitrate lyase/phosphoenolpyruvate mutase family protein | AJAP_RS07590 | Not Available | + | 1537369 - 1538112 | 25294.2 |
| cation acetate symporter | AJAP_RS07595 | Not Available | - | 1538177 - 1539805 | 56028.7 |
| duf485 domain-containing protein | AJAP_RS07600 | Not Available | - | 1539802 - 1540143 | 12890.6 |
| cation acetate symporter | AJAP_RS07605 | Not Available | - | 1540211 - 1541944 | 60476.7 |
| membrane protein | AJAP_RS07610 | Not Available | - | 1541944 - 1542291 | 12925.1 |
| lyttr family dna-binding domain-containing protein | AJAP_RS07615 | Not Available | - | 1542288 - 1543058 | 27545.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.