Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-his | Not Available | Not Available | + | 1516082 - 1516157 | Not Available |
| oligoribonuclease | AJAP_RS07475 | Not Available | - | 1516235 - 1516843 | 22745.1 |
| helicase hera-like domain-containing protein | AJAP_RS07480 | Not Available | + | 1516956 - 1518482 | 53903.4 |
| duf3224 domain-containing protein | AJAP_RS07485 | Not Available | + | 1518530 - 1518907 | 13099.1 |
| s1c family serine protease | AJAP_RS07490 | Not Available | - | 1518994 - 1519941 | 31116.4 |
| m20 family metallopeptidase | AJAP_RS07495 | Not Available | - | 1520022 - 1521350 | 45834.2 |
| class i sam-dependent methyltransferase | AJAP_RS07500 | Not Available | - | 1521347 - 1522117 | 27408.2 |
| dna-3-methyladenine glycosylase | AJAP_RS07505 | Not Available | + | 1522260 - 1523201 | 33908.8 |
| m50 family metallopeptidase | AJAP_RS07510 | Not Available | + | 1523237 - 1523950 | 24854.2 |
| aldehyde dehydrogenase family protein | AJAP_RS07515 | Not Available | + | 1524003 - 1525235 | 43269.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.