Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna methyltransferase | AJAP_RS07425 | Not Available | + | 1509377 - 1510342 | 34806.3 |
| site-specific dna-methyltransferase | AJAP_RS42420 | Not Available | + | 1510339 - 1511592 | 45466.6 |
| site-specific dna-methyltransferase | AJAP_RS07435 | Not Available | + | 1511724 - 1512458 | 26691.3 |
| helix-turn-helix transcriptional regulator | AJAP_RS07440 | Not Available | + | 1512455 - 1512688 | 8228.99 |
| hypothetical protein | AJAP_RS07445 | Not Available | - | 1512910 - 1513272 | 13330.1 |
| hypothetical protein | AJAP_RS44730 | Not Available | - | 1513269 - 1513580 | 11041.4 |
| ydcf family protein | AJAP_RS45320 | Not Available | + | 1513603 - 1514097 | 17897.2 |
| Trna-lys | Not Available | Not Available | + | 1514343 - 1514415 | Not Available |
| ig-like domain-containing protein | AJAP_RS07465 | Not Available | + | 1514653 - 1515831 | 40847.1 |
| hypothetical protein | AJAP_RS43590 | Not Available | + | 1515904 - 1516089 | 6285.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.