Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| c40 family peptidase | AJAP_RS07375 | Not Available | - | 1495646 - 1496605 | 33386.8 |
| replication-relaxation family protein | AJAP_RS07380 | Not Available | - | 1496620 - 1497654 | 38363.8 |
| type iv secretory system conjugative dna transfer family protein | AJAP_RS07385 | Not Available | - | 1497720 - 1500221 | 90274.5 |
| gp88 family protein | AJAP_RS07390 | Not Available | - | 1500256 - 1501089 | 30978.0 |
| virb4 family type iv secretion system protein | AJAP_RS07395 | Not Available | - | 1501149 - 1503059 | 68721.5 |
| prgi family protein | AJAP_RS07400 | Not Available | - | 1503056 - 1504213 | 40879.0 |
| hypothetical protein | AJAP_RS07405 | Not Available | - | 1504210 - 1506312 | 72062.8 |
| pilin | AJAP_RS45315 | Not Available | - | 1506377 - 1506865 | 16674.9 |
| hypothetical protein | AJAP_RS07415 | Not Available | - | 1506856 - 1507878 | 36423.8 |
| hypothetical protein | AJAP_RS07420 | Not Available | + | 1508404 - 1509384 | 35394.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.