Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | AJAP_RS07230 | Not Available | + | 1465702 - 1468392 | 94731.0 |
| helix-turn-helix domain-containing protein | AJAP_RS07235 | Not Available | - | 1468395 - 1468778 | 13997.6 |
| prepilin peptidase | AJAP_RS07240 | Not Available | + | 1469223 - 1469864 | 21645.0 |
| hypothetical protein | AJAP_RS07245 | Not Available | + | 1469932 - 1470483 | 18970.1 |
| hypothetical protein | AJAP_RS44725 | Not Available | + | 1471251 - 1471436 | 6576.63 |
| saf domain-containing protein | AJAP_RS07255 | Not Available | + | 1471515 - 1472216 | 23507.2 |
| hypothetical protein | AJAP_RS07260 | Not Available | + | 1472258 - 1473085 | 28347.4 |
| cpaf family protein | AJAP_RS07265 | Not Available | + | 1473349 - 1474605 | 44675.3 |
| type ii secretion system f family protein | AJAP_RS07270 | Not Available | + | 1474602 - 1475528 | 32483.0 |
| type ii secretion system f family protein | AJAP_RS07275 | Not Available | + | 1475525 - 1476430 | 31288.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.