Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | AJAP_RS07185 | Not Available | - | 1456396 - 1457487 | 40404.6 |
| atp-grasp ribosomal peptide maturase | AJAP_RS07190 | Not Available | - | 1457535 - 1458488 | 34945.7 |
| putative atp-grasp-modified ripp | AJAP_RS07195 | Not Available | - | 1458490 - 1458816 | 11437.0 |
| hypothetical protein | AJAP_RS07200 | Not Available | - | 1458896 - 1459222 | 11382.4 |
| trypsin-like serine protease | AJAP_RS07205 | Not Available | - | 1459298 - 1460206 | 31322.9 |
| nudix domain-containing protein | AJAP_RS07210 | Not Available | - | 1461040 - 1461447 | 14999.8 |
| helix-turn-helix domain-containing protein | AJAP_RS45310 | Not Available | - | 1461640 - 1461951 | 11913.2 |
| rna polymerase sigma factor | AJAP_RS07215 | Not Available | - | 1462364 - 1462969 | 22640.9 |
| xre family transcriptional regulator | AJAP_RS44720 | Not Available | + | 1464109 - 1464891 | 27897.0 |
| nudix hydrolase | AJAP_RS07225 | Not Available | - | 1464896 - 1465453 | 20995.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.