Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | AJAP_RS00465 | Not Available | + | 94139 - 94786 | 22138.8 |
| abc transporter atp-binding protein | AJAP_RS00470 | Not Available | + | 94773 - 95954 | 42786.2 |
| abc transporter permease | AJAP_RS00475 | Not Available | + | 95951 - 96727 | 26837.5 |
| glycine betaine abc transporter substrate-binding protein | AJAP_RS00480 | Not Available | + | 96730 - 97689 | 34634.1 |
| duf6474 family protein | AJAP_RS00485 | Not Available | - | 97762 - 98226 | 16179.7 |
| tm0106 family recb-like putative nuclease | AJAP_RS00490 | Not Available | + | 98281 - 99963 | 62000.2 |
| padr family transcriptional regulator | AJAP_RS00495 | Not Available | + | 100043 - 100651 | 22613.5 |
| class i sam-dependent methyltransferase | AJAP_RS00500 | Not Available | + | 100769 - 101443 | 24711.7 |
| sdr family nad(p)-dependent oxidoreductase | AJAP_RS00505 | Not Available | - | 101514 - 102272 | 25858.2 |
| udp-glucose dehydrogenase family protein | AJAP_RS00510 | Not Available | + | 102431 - 103741 | 45454.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.