Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| error-prone dna polymerase | AJAP_RS07045 | Not Available | + | 1428044 - 1431367 | 120115.0 |
| hypothetical protein | AJAP_RS07050 | Not Available | + | 1431364 - 1431981 | 22628.4 |
| arsr/smtb family transcription factor | AJAP_RS07055 | Not Available | + | 1432170 - 1432532 | 13070.9 |
| heavy metal translocating p-type atpase | AJAP_RS07060 | Not Available | + | 1432529 - 1434589 | 70468.9 |
| hypothetical protein | AJAP_RS07065 | Not Available | + | 1434710 - 1434880 | 5622.1 |
| duf169 domain-containing protein | AJAP_RS07070 | Not Available | + | 1435453 - 1436157 | 24822.8 |
| helix-turn-helix transcriptional regulator | AJAP_RS07075 | Not Available | + | 1436342 - 1436761 | 15006.1 |
| hypothetical protein | AJAP_RS43555 | Not Available | + | 1436792 - 1436974 | 6602.41 |
| peptidase domain-containing abc transporter | AJAP_RS07085 | Not Available | + | 1436971 - 1439253 | 80840.6 |
| bacteriocin | AJAP_RS43560 | Not Available | + | 1439625 - 1439750 | 4294.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.