Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AJAP_RS06960 | Not Available | - | 1394551 - 1394781 | 8008.5 |
| hypothetical protein | AJAP_RS42850 | Not Available | - | 1394830 - 1395387 | 20519.1 |
| trypsin-like peptidase domain-containing protein | AJAP_RS06965 | Not Available | - | 1395515 - 1399588 | 148289.0 |
| cu044_2847 family protein | AJAP_RS06970 | Not Available | - | 1399599 - 1399928 | 11402.8 |
| aaa family atpase | AJAP_RS06975 | Not Available | - | 1400842 - 1402695 | 68498.5 |
| abc-three component system middle component 2 | AJAP_RS06980 | Not Available | - | 1402683 - 1403171 | 18210.7 |
| abc-three component system protein | AJAP_RS06985 | Not Available | - | 1403168 - 1404268 | 40629.9 |
| zinc-ribbon domain-containing protein | AJAP_RS42855 | Not Available | + | 1404886 - 1406997 | 79057.6 |
| ydcf family protein | AJAP_RS44700 | Not Available | - | 1407221 - 1407555 | 11950.0 |
| hypothetical protein | AJAP_RS45030 | Not Available | - | 1407668 - 1407790 | 4488.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.