Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AJAP_RS06915 | Not Available | + | 1384314 - 1385066 | 27964.5 |
| hypothetical protein | AJAP_RS06920 | Not Available | - | 1385070 - 1385717 | 22270.7 |
| hypothetical protein | AJAP_RS43540 | Not Available | - | 1385951 - 1387360 | 51371.0 |
| duf4917 family protein | AJAP_RS06930 | Not Available | - | 1387587 - 1388639 | 39245.3 |
| duf4041 domain-containing protein | AJAP_RS06935 | Not Available | - | 1388689 - 1390272 | 59906.6 |
| tyrosine-type recombinase/integrase | AJAP_RS42845 | Not Available | + | 1390507 - 1390923 | 14659.5 |
| hypothetical protein | AJAP_RS06940 | Not Available | + | 1391206 - 1391892 | 24138.6 |
| sigma-70 family rna polymerase sigma factor | AJAP_RS44695 | Not Available | - | 1392142 - 1393479 | 48802.4 |
| rna polymerase sigma factor | AJAP_RS06950 | Not Available | - | 1393476 - 1394168 | 25667.5 |
| hypothetical protein | AJAP_RS06955 | Not Available | - | 1394165 - 1394386 | 7828.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.