Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | AJAP_RS06765 | Not Available | - | 1350843 - 1351475 | 23136.6 |
| chitinase | AJAP_RS06770 | Not Available | + | 1351719 - 1353488 | 60947.4 |
| cellulose binding domain-containing protein | AJAP_RS06775 | Not Available | - | 1353732 - 1355075 | 46309.8 |
| glycosyl hydrolase family 18 protein | AJAP_RS06780 | Not Available | - | 1355113 - 1356750 | 57216.0 |
| rpib/laca/lacb family sugar-phosphate isomerase | AJAP_RS06785 | Not Available | - | 1357012 - 1357443 | 15106.8 |
| tetr/acrr family transcriptional regulator | AJAP_RS06790 | Not Available | + | 1357504 - 1358133 | 22555.2 |
| dm13 domain-containing protein | AJAP_RS06795 | Not Available | - | 1358184 - 1358726 | 19194.9 |
| bile acid:sodium symporter family protein | AJAP_RS06800 | Not Available | + | 1358870 - 1359736 | 29796.0 |
| alpha/beta fold hydrolase | AJAP_RS06805 | Not Available | + | 1359751 - 1360554 | 28503.6 |
| aspartate aminotransferase family protein | AJAP_RS06810 | Not Available | - | 1360621 - 1361949 | 47531.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.