Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | AJAP_RS06615 | Not Available | - | 1319419 - 1320843 | 51402.7 |
| mfs transporter | AJAP_RS06620 | Not Available | - | 1321230 - 1322444 | 41465.5 |
| sdr family nad(p)-dependent oxidoreductase | AJAP_RS06625 | Not Available | + | 1322816 - 1323709 | 31903.2 |
| maleylpyruvate isomerase n-terminal domain-containing protein | AJAP_RS06630 | Not Available | - | 1323863 - 1324519 | 23441.5 |
| amp-dependent synthetase/ligase | AJAP_RS06635 | Not Available | - | 1324643 - 1326508 | 65951.0 |
| hypothetical protein | AJAP_RS06640 | Not Available | + | 1326658 - 1327305 | 23316.1 |
| kynureninase | AJAP_RS06645 | Not Available | + | 1327289 - 1328470 | 41818.8 |
| hypothetical protein | AJAP_RS06650 | Not Available | + | 1328712 - 1329062 | 12465.1 |
| nitrate- and nitrite sensing domain-containing protein | AJAP_RS06655 | Not Available | + | 1329436 - 1331949 | 91447.8 |
| roadblock/lc7 domain-containing protein | AJAP_RS06660 | Not Available | + | 1331950 - 1332360 | 14159.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.