Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| metalloregulator arsr/smtb family transcription factor | AJAP_RS06565 | Not Available | + | 1309464 - 1310264 | 29512.8 |
| dihydrofolate reductase family protein | AJAP_RS06570 | Not Available | + | 1310270 - 1310869 | 21340.3 |
| Trna-leu | Not Available | Not Available | + | 1311460 - 1311536 | Not Available |
| duf3618 domain-containing protein | AJAP_RS06580 | Not Available | + | 1311662 - 1311883 | 7933.91 |
| hypothetical protein | AJAP_RS06585 | Not Available | - | 1311887 - 1312297 | 14424.1 |
| tetr/acrr family transcriptional regulator | AJAP_RS06590 | Not Available | - | 1312531 - 1313130 | 22404.8 |
| nad(p)/fad-dependent oxidoreductase | AJAP_RS06595 | Not Available | + | 1313211 - 1314671 | 54941.6 |
| helix-turn-helix domain-containing protein | AJAP_RS06600 | Not Available | - | 1314740 - 1315210 | 18163.1 |
| lcp family protein | AJAP_RS06605 | Not Available | - | 1315395 - 1316801 | 48948.6 |
| phospholipase a2 | AJAP_RS06610 | Not Available | - | 1317180 - 1319342 | 75592.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.