Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 25 protein | AJAP_RS06515 | Not Available | + | 1300573 - 1301532 | 34185.3 |
| (2fe-2s)-binding protein | AJAP_RS06520 | Not Available | - | 1301624 - 1302079 | 16209.3 |
| fad binding domain-containing protein | AJAP_RS06525 | Not Available | - | 1302076 - 1302924 | 29478.4 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | AJAP_RS06530 | Not Available | - | 1302921 - 1305251 | 82331.8 |
| transcriptional regulator | AJAP_RS06535 | Not Available | - | 1305300 - 1305620 | 11423.7 |
| hypothetical protein | AJAP_RS06540 | Not Available | - | 1305617 - 1306066 | 15883.0 |
| lysr family transcriptional regulator | AJAP_RS06545 | Not Available | - | 1306099 - 1307043 | 35143.2 |
| dinb family protein | AJAP_RS06550 | Not Available | - | 1307043 - 1307540 | 19042.0 |
| aminotransferase class iv family protein | AJAP_RS06555 | Not Available | + | 1307595 - 1308368 | 27790.4 |
| methyltransferase | AJAP_RS06560 | Not Available | + | 1308423 - 1309430 | 36137.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.