Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspartate/glutamate racemase family protein | AJAP_RS06465 | Not Available | + | 1293659 - 1294372 | 25909.9 |
| arylamine n-acetyltransferase family protein | AJAP_RS06470 | Not Available | - | 1294333 - 1295205 | 31427.0 |
| rhomboid family intramembrane serine protease | AJAP_RS06475 | Not Available | + | 1295288 - 1295956 | 23077.5 |
| glutamate racemase | AJAP_RS06480 | Not Available | + | 1295953 - 1296759 | 28443.0 |
| mbl fold metallo-hydrolase | AJAP_RS06485 | Not Available | + | 1296789 - 1297556 | 27080.0 |
| ribonuclease ph | AJAP_RS06490 | Not Available | + | 1297580 - 1298356 | 27338.4 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | AJAP_RS06495 | Not Available | + | 1298353 - 1298958 | 20998.8 |
| thioredoxin-dependent thiol peroxidase | AJAP_RS06500 | Not Available | - | 1299011 - 1299484 | 17057.2 |
| hypothetical protein | AJAP_RS06505 | Not Available | - | 1299513 - 1300058 | 18301.9 |
| hypothetical protein | AJAP_RS06510 | Not Available | - | 1300260 - 1300442 | 7057.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.