Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| choice-of-anchor p family protein | AJAP_RS06415 | Not Available | + | 1286433 - 1287098 | 22665.1 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | AJAP_RS06420 | Not Available | - | 1287168 - 1287821 | 22304.9 |
| isochorismatase family protein | AJAP_RS06425 | Not Available | - | 1287818 - 1288393 | 19789.9 |
| nicotinate phosphoribosyltransferase | AJAP_RS06430 | Not Available | - | 1288413 - 1289717 | 46087.6 |
| atp-dependent clp protease adapter clps | AJAP_RS06435 | Not Available | + | 1289792 - 1290091 | 11037.1 |
| duf2017 domain-containing protein | AJAP_RS06440 | Not Available | + | 1290088 - 1290645 | 20469.1 |
| p1 family peptidase | AJAP_RS06445 | Not Available | + | 1290642 - 1291634 | 33335.4 |
| mov34/mpn/pad-1 family protein | AJAP_RS06450 | Not Available | + | 1291755 - 1292171 | 15537.9 |
| moad/this family protein | AJAP_RS06455 | Not Available | + | 1292247 - 1292519 | 9658.54 |
| plp-dependent cysteine synthase family protein | AJAP_RS06460 | Not Available | + | 1292523 - 1293473 | 33677.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.