Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit epsilon | AJAP_RS06115 | Not Available | + | 1230830 - 1231195 | 12437.6 |
| duf2550 domain-containing protein | AJAP_RS06120 | Not Available | + | 1231221 - 1231655 | 16059.3 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | AJAP_RS06125 | Not Available | + | 1231760 - 1232995 | 43310.9 |
| hypothetical protein | AJAP_RS06130 | Not Available | + | 1233055 - 1233207 | 5678.45 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | AJAP_RS06135 | Not Available | - | 1233240 - 1233812 | 20767.8 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | AJAP_RS06140 | Not Available | + | 1233874 - 1235148 | 45054.2 |
| trypsin-like serine protease | AJAP_RS06145 | Not Available | - | 1235149 - 1236021 | 29789.9 |
| hypothetical protein | AJAP_RS06150 | Not Available | - | 1236093 - 1236755 | 21546.1 |
| lyse family translocator | AJAP_RS06155 | Not Available | - | 1236818 - 1237441 | 21764.9 |
| lyse family translocator | AJAP_RS06160 | Not Available | - | 1237438 - 1238064 | 22500.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.