Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 1 | AJAP_RS06015 | Not Available | + | 1210478 - 1211548 | 39088.5 |
| hypothetical protein | AJAP_RS06020 | Not Available | - | 1211560 - 1211946 | 13999.9 |
| hypothetical protein | AJAP_RS06025 | Not Available | - | 1211976 - 1212713 | 26347.6 |
| hypothetical protein | AJAP_RS06030 | Not Available | + | 1212859 - 1214586 | 61560.6 |
| hypothetical protein | AJAP_RS06035 | Not Available | - | 1214591 - 1216024 | 51376.1 |
| alpha/beta fold hydrolase | AJAP_RS06040 | Not Available | - | 1216056 - 1216841 | 26910.0 |
| merr family transcriptional regulator | AJAP_RS06045 | Not Available | + | 1216901 - 1217275 | 14119.2 |
| hd domain-containing protein | AJAP_RS06050 | Not Available | + | 1217311 - 1217859 | 19956.4 |
| peptide chain release factor n(5)-glutamine methyltransferase | AJAP_RS06055 | Not Available | + | 1217944 - 1218810 | 30723.1 |
| m6 family metalloprotease domain-containing protein | AJAP_RS06060 | Not Available | + | 1219010 - 1220995 | 70752.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.