Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3105 domain-containing protein | AJAP_RS05965 | Not Available | - | 1198975 - 1199766 | 27957.7 |
| arginine--trna ligase | AJAP_RS05970 | Not Available | + | 1199970 - 1201625 | 59807.9 |
| diaminopimelate decarboxylase | AJAP_RS05975 | Not Available | + | 1201632 - 1203065 | 51174.5 |
| homoserine dehydrogenase | AJAP_RS05980 | Not Available | + | 1203069 - 1204379 | 45136.7 |
| threonine synthase | AJAP_RS05985 | Not Available | + | 1204376 - 1205437 | 36157.4 |
| homoserine kinase | AJAP_RS05990 | Not Available | + | 1205434 - 1206315 | 30388.1 |
| transcription termination factor rho | AJAP_RS05995 | Not Available | + | 1206735 - 1208708 | 71255.6 |
| aaa family atpase | AJAP_RS06000 | Not Available | + | 1208789 - 1209322 | 19922.3 |
| hypothetical protein | AJAP_RS06005 | Not Available | - | 1209386 - 1209931 | 18162.2 |
| 50s ribosomal protein l31 | AJAP_RS06010 | Not Available | + | 1210155 - 1210382 | 8437.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.