Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ybab/ebfc family nucleoid-associated protein | AJAP_RS05915 | Not Available | + | 1192054 - 1192527 | 16763.4 |
| hypothetical protein | AJAP_RS05920 | Not Available | + | 1192524 - 1192835 | 11097.0 |
| hypothetical protein | AJAP_RS05925 | Not Available | + | 1192832 - 1193215 | 13561.0 |
| hypothetical protein | AJAP_RS05930 | Not Available | + | 1193212 - 1193943 | 25619.8 |
| duf3558 domain-containing protein | AJAP_RS05935 | Not Available | + | 1193940 - 1194545 | 21377.3 |
| duf6000 family protein | AJAP_RS05940 | Not Available | + | 1194996 - 1195616 | 22634.2 |
| Trna-arg | Not Available | Not Available | + | 1195732 - 1195804 | Not Available |
| epoxide hydrolase family protein | AJAP_RS05950 | Not Available | + | 1196002 - 1197129 | 41718.8 |
| cation diffusion facilitator family transporter | AJAP_RS05955 | Not Available | + | 1197281 - 1198198 | 31953.3 |
| duf305 domain-containing protein | AJAP_RS05960 | Not Available | - | 1198267 - 1198965 | 24943.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.