Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sgcj/ecac family oxidoreductase | AJAP_RS05865 | Not Available | - | 1183228 - 1183665 | 15408.1 |
| acyl-coa dehydrogenase family protein | AJAP_RS05870 | Not Available | - | 1183678 - 1184847 | 41968.1 |
| cation:proton antiporter | AJAP_RS05875 | Not Available | - | 1184924 - 1186324 | 48254.8 |
| hypothetical protein | AJAP_RS05880 | Not Available | + | 1186762 - 1187049 | 10953.5 |
| hypothetical protein | AJAP_RS05885 | Not Available | + | 1187099 - 1187407 | 11791.6 |
| hypothetical protein | AJAP_RS42405 | Not Available | + | 1187432 - 1187950 | 18625.2 |
| effector-associated constant component eacc1 | AJAP_RS05895 | Not Available | + | 1188125 - 1188490 | 13062.7 |
| caspase domain-containing protein | AJAP_RS05900 | Not Available | + | 1188487 - 1189980 | 53408.8 |
| hypothetical protein | AJAP_RS42410 | Not Available | - | 1190206 - 1190553 | 11979.9 |
| winged helix-turn-helix domain-containing protein | AJAP_RS05910 | Not Available | + | 1190803 - 1191804 | 36519.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.