Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | AJAP_RS05815 | Not Available | + | 1174650 - 1175354 | 24618.8 |
| rida family protein | AJAP_RS05820 | Not Available | - | 1175355 - 1175732 | 13425.8 |
| hypothetical protein | AJAP_RS05825 | Not Available | - | 1175791 - 1177050 | 44066.4 |
| type vii secretion target | AJAP_RS05830 | Not Available | - | 1177047 - 1177382 | 12194.3 |
| ybab/ebfc family nucleoid-associated protein | AJAP_RS05835 | Not Available | - | 1177376 - 1177951 | 20684.0 |
| gnat family n-acetyltransferase | AJAP_RS05840 | Not Available | + | 1178103 - 1178564 | 16849.1 |
| srpbcc family protein | AJAP_RS05845 | Not Available | - | 1178591 - 1179208 | 22315.1 |
| dna-binding response regulator | AJAP_RS05850 | Not Available | - | 1179657 - 1180265 | 21794.7 |
| duf6235 family protein | AJAP_RS05855 | Not Available | - | 1180419 - 1180700 | 10329.6 |
| excinuclease abc subunit uvra | AJAP_RS05860 | Not Available | - | 1180793 - 1183102 | 82101.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.