Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | AJAP_RS05765 | Not Available | - | 1164044 - 1165486 | 51015.1 |
| xre family transcriptional regulator | AJAP_RS05770 | Not Available | + | 1166061 - 1167056 | 35659.2 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | AJAP_RS05775 | Not Available | + | 1167422 - 1168159 | 26744.7 |
| feccd family abc transporter permease | AJAP_RS05780 | Not Available | + | 1168143 - 1169234 | 37134.6 |
| abc transporter atp-binding protein | AJAP_RS05785 | Not Available | + | 1169234 - 1170022 | 28231.2 |
| abc transporter substrate-binding protein | AJAP_RS05790 | Not Available | + | 1170019 - 1171002 | 35081.5 |
| cysteine synthase family protein | AJAP_RS05795 | Not Available | + | 1170999 - 1172054 | 38637.4 |
| atp-grasp domain-containing protein | AJAP_RS05800 | Not Available | + | 1172051 - 1173241 | 42082.5 |
| hypothetical protein | AJAP_RS05805 | Not Available | - | 1173315 - 1173893 | 19695.6 |
| tetr/acrr family transcriptional regulator | AJAP_RS05810 | Not Available | - | 1173942 - 1174559 | 22713.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.