Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | AJAP_RS05715 | Not Available | - | 1153732 - 1154166 | 16337.0 |
| nitroreductase/quinone reductase family protein | AJAP_RS05720 | Not Available | + | 1154277 - 1154948 | 24234.8 |
| duf11 domain-containing protein | AJAP_RS05725 | Not Available | + | 1155103 - 1155918 | 27197.2 |
| rna polymerase sigma factor | AJAP_RS05730 | Not Available | - | 1155964 - 1157160 | 43223.7 |
| ycii family protein | AJAP_RS05735 | Not Available | - | 1157161 - 1157553 | 14451.7 |
| isopenicillin n synthase family dioxygenase | AJAP_RS05740 | Not Available | - | 1157660 - 1158652 | 35761.0 |
| mdr family mfs transporter | AJAP_RS05745 | Not Available | - | 1158684 - 1160261 | 54535.8 |
| udp-glucose dehydrogenase family protein | AJAP_RS05750 | Not Available | - | 1160331 - 1161680 | 46632.8 |
| hypothetical protein | AJAP_RS05755 | Not Available | - | 1161782 - 1162972 | 42840.3 |
| gfo/idh/moca family oxidoreductase | AJAP_RS05760 | Not Available | - | 1162969 - 1164066 | 40241.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.