Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | AJAP_RS05565 | Not Available | - | 1124391 - 1124909 | 19393.2 |
| aldo/keto reductase | AJAP_RS05570 | Not Available | + | 1125017 - 1125991 | 35280.4 |
| pyrroloquinoline quinone biosynthesis protein pqqb | AJAP_RS05575 | Not Available | - | 1125988 - 1126851 | 30354.2 |
| pyrroloquinoline quinone biosynthesis protein pqqe | AJAP_RS05580 | Not Available | - | 1126848 - 1127927 | 39655.5 |
| pyrroloquinoline quinone biosynthesis peptide chaperone pqqd | AJAP_RS05585 | Not Available | - | 1127918 - 1128190 | 9935.01 |
| pyrroloquinoline-quinone synthase pqqc | AJAP_RS05590 | Not Available | - | 1128193 - 1128882 | 26080.2 |
| pyrroloquinoline quinone precursor peptide pqqa | AJAP_RS05595 | Not Available | - | 1128959 - 1129054 | 3669.28 |
| pqq-dependent sugar dehydrogenase | AJAP_RS05600 | Not Available | + | 1129309 - 1130295 | 34155.2 |
| ws/dgat/mgat family o-acyltransferase | AJAP_RS05605 | Not Available | - | 1130347 - 1131723 | 50025.4 |
| glutathione s-transferase family protein | AJAP_RS05610 | Not Available | + | 1131820 - 1132833 | 37602.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.