Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alanine dehydrogenase | AJAP_RS05315 | Not Available | - | 1067989 - 1069104 | 38775.5 |
| zinc-binding dehydrogenase | AJAP_RS05320 | Not Available | + | 1069270 - 1070211 | 31384.5 |
| pyridoxamine 5'-phosphate oxidase family protein | AJAP_RS05325 | Not Available | + | 1070211 - 1070630 | 15688.9 |
| hypothetical protein | AJAP_RS05330 | Not Available | + | 1070748 - 1070975 | 8141.57 |
| pucr family transcriptional regulator | AJAP_RS05335 | Not Available | - | 1071097 - 1072650 | 55145.3 |
| padr family transcriptional regulator | AJAP_RS05340 | Not Available | - | 1072860 - 1073210 | 12470.7 |
| voc family protein | AJAP_RS05345 | Not Available | + | 1073268 - 1073666 | 15152.6 |
| bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase | AJAP_RS05350 | Not Available | + | 1073746 - 1075047 | 46028.1 |
| homoserine o-acetyltransferase | AJAP_RS05355 | Not Available | + | 1075044 - 1076138 | 38243.8 |
| hypothetical protein | AJAP_RS05360 | Not Available | - | 1076276 - 1076773 | 17847.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.