Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | AJAP_RS05215 | Not Available | + | 1043888 - 1044976 | 38445.0 |
| abc transporter permease | AJAP_RS05220 | Not Available | + | 1044976 - 1045659 | 23997.1 |
| abc transporter permease | AJAP_RS05225 | Not Available | + | 1045656 - 1046345 | 23629.6 |
| abc transporter substrate-binding protein | AJAP_RS05230 | Not Available | + | 1046342 - 1047241 | 31980.0 |
| gnat family n-acetyltransferase | AJAP_RS05235 | Not Available | - | 1047318 - 1047833 | 18126.8 |
| s8 family peptidase | AJAP_RS05240 | Not Available | + | 1048227 - 1049792 | 52267.6 |
| hypothetical protein | AJAP_RS05245 | Not Available | + | 1049925 - 1050641 | 24554.0 |
| smp-30/gluconolactonase/lre family protein | AJAP_RS05250 | Not Available | - | 1050638 - 1051426 | 27701.4 |
| multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit | AJAP_RS05255 | Not Available | - | 1051553 - 1055275 | 136114.0 |
| hypothetical protein | AJAP_RS05260 | Not Available | + | 1055648 - 1055914 | 9884.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.