Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | AJAP_RS05020 | Not Available | - | 1003911 - 1006349 | 88328.2 |
| iclr family transcriptional regulator | AJAP_RS05025 | Not Available | - | 1006507 - 1007292 | 27775.1 |
| bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit | AJAP_RS05030 | Not Available | + | 1007445 - 1007762 | 11269.2 |
| nad(p)/fad-dependent oxidoreductase | AJAP_RS05035 | Not Available | + | 1007759 - 1008895 | 39327.3 |
| mtrab system response regulator mtra | AJAP_RS05040 | Not Available | + | 1009007 - 1009684 | 24648.2 |
| mtrab system histidine kinase mtrb | AJAP_RS05045 | Not Available | + | 1009692 - 1011407 | 61840.1 |
| lpqb family beta-propeller domain-containing protein | AJAP_RS05050 | Not Available | + | 1011404 - 1013134 | 61199.5 |
| comf family protein | AJAP_RS05055 | Not Available | + | 1013500 - 1014138 | 21925.8 |
| ribosome hibernation-promoting factor, hpf/yfia family | AJAP_RS05060 | Not Available | + | 1014691 - 1015380 | 25925.5 |
| preprotein translocase subunit seca | AJAP_RS05065 | Not Available | + | 1015616 - 1018447 | 105499.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.