Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AJAP_RS04975 | Not Available | - | 992441 - 994735 | 80199.0 |
| adenosylhomocysteinase | AJAP_RS04980 | Not Available | + | 994827 - 996299 | 53903.4 |
| hypothetical protein | AJAP_RS04985 | Not Available | - | 996367 - 997362 | 36463.6 |
| papain-like cysteine protease family protein | AJAP_RS04990 | Not Available | + | 997613 - 998182 | 20598.3 |
| hypothetical protein | AJAP_RS04995 | Not Available | + | 998179 - 998946 | 26228.9 |
| dtmp kinase | AJAP_RS05000 | Not Available | + | 999053 - 999703 | 23671.9 |
| hypothetical protein | AJAP_RS43515 | Not Available | - | 999700 - 1000281 | 21235.4 |
| hypothetical protein | AJAP_RS43520 | Not Available | + | 1000472 - 1001668 | 44485.6 |
| aromatic ring-hydroxylating oxygenase subunit alpha | AJAP_RS05010 | Not Available | - | 1001672 - 1002772 | 41582.1 |
| n-methyl-l-tryptophan oxidase | AJAP_RS05015 | Not Available | - | 1002769 - 1003914 | 41816.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.