Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3499 domain-containing protein | AJAP_RS04925 | Not Available | + | 980486 - 980839 | 12402.5 |
| phosphomannomutase/phosphoglucomutase | AJAP_RS04930 | Not Available | + | 980912 - 982267 | 47600.3 |
| trm112 family protein | AJAP_RS04935 | Not Available | + | 982320 - 982541 | 7609.89 |
| hypothetical protein | AJAP_RS04940 | Not Available | + | 982525 - 983616 | 37549.0 |
| mannose-6-phosphate isomerase, class i | AJAP_RS04945 | Not Available | + | 983683 - 984906 | 43944.4 |
| hypothetical protein | AJAP_RS04950 | Not Available | + | 985096 - 985605 | 16952.0 |
| afsr/sarp family transcriptional regulator | AJAP_RS04955 | Not Available | - | 985658 - 988657 | 107491.0 |
| cation diffusion facilitator family transporter | AJAP_RS04960 | Not Available | + | 988802 - 989716 | 31981.3 |
| amino acid permease | AJAP_RS04965 | Not Available | + | 989948 - 991468 | 53455.9 |
| lpxtg cell wall anchor domain-containing protein | AJAP_RS04970 | Not Available | + | 991692 - 992396 | 24035.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.