Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | AJAP_RS04875 | Not Available | + | 968192 - 969124 | 33311.3 |
| abc transporter atp-binding protein | AJAP_RS04880 | Not Available | - | 969388 - 971169 | 64113.4 |
| n-acetyl-1-d-myo-inositol-2-amino-2-deoxy-alpha- d-glucopyranoside deacetylase | AJAP_RS04885 | Not Available | + | 971328 - 972170 | 29143.1 |
| hypothetical protein | AJAP_RS04890 | Not Available | + | 972167 - 972583 | 14130.1 |
| hypothetical protein | AJAP_RS04895 | Not Available | + | 972576 - 973382 | 29149.1 |
| site-2 protease family protein | AJAP_RS04900 | Not Available | - | 973366 - 974127 | 26793.4 |
| whib family transcriptional regulator | AJAP_RS04905 | Not Available | + | 974299 - 974682 | 14486.7 |
| glycosyltransferase family 2 protein | AJAP_RS04910 | Not Available | + | 974815 - 978081 | 111177.0 |
| is110 family transposase | AJAP_RS04915 | Not Available | - | 978348 - 979421 | 37824.2 |
| metallopeptidase family protein | AJAP_RS04920 | Not Available | - | 979938 - 980369 | 15466.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.