Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya zeae str. MS2
Accession NumberNZ_CP025799.1
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocase subunit tate | C1O30_RS06010 | Not Available | + | 1315976 - 1316185 | 7204.8 |
| lipoyl synthase | C1O30_RS06015 | Not Available | - | 1316289 - 1317254 | 36309.0 |
| lipoyl(octanoyl) transferase lipb | C1O30_RS06020 | Not Available | - | 1317445 - 1318155 | 26291.6 |
| duf493 family protein ybed | C1O30_RS06025 | Not Available | - | 1318266 - 1318529 | 9786.9 |
| d-alanyl-d-alanine carboxypeptidase daca | C1O30_RS06030 | Not Available | - | 1318664 - 1319875 | 44257.3 |
| endolytic peptidoglycan transglycosylase rlpa | C1O30_RS06035 | Not Available | - | 1320055 - 1321206 | 39948.0 |
| peptidoglycan glycosyltransferase mrdb | C1O30_RS06040 | Not Available | - | 1321216 - 1322328 | 40519.4 |
| peptidoglycan dd-transpeptidase mrda | C1O30_RS06045 | Not Available | - | 1322336 - 1324246 | 71945.0 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | C1O30_RS06050 | Not Available | - | 1324283 - 1324753 | 17610.4 |
| ribosome silencing factor | C1O30_RS06055 | Not Available | - | 1324755 - 1325072 | 11566.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
