Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
495674 bp
Thymine Count
486053 bp
Guanine Count
562782 bp
Cytosine Count
551080 bp
Genome Length
2095589 bp
Protein-coding Genes
1942 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1862_01131 | Not Available | + | 1222124 - 1222252 | 4777.64 |
| phosphoenolpyruvate-dependent sugar phosphotransferase system, eiia 2 | HMPREF1862_01132 | Not Available | + | 1222278 - 1224362 | 71158.0 |
| phosphocarrier, hpr family | HMPREF1862_01133 | Not Available | + | 1224398 - 1224658 | 8613.5 |
| phosphocarrier, hpr family | HMPREF1862_01134 | Not Available | + | 1224726 - 1225652 | 31784.7 |
| nucleoside diphosphate kinase | HMPREF1862_01135 | Not Available | + | 1225694 - 1226143 | 16443.5 |
| segregation protein smc | HMPREF1862_01136 | Not Available | + | 1226157 - 1229834 | 133456.0 |
| hypothetical protein | HMPREF1862_01137 | Not Available | + | 1229918 - 1230682 | 28010.6 |
| signal recognition particle-docking protein ftsy | HMPREF1862_01138 | Not Available | + | 1230771 - 1232096 | 46191.9 |
| signal recognition particle protein | HMPREF1862_01139 | Not Available | + | 1232132 - 1233718 | 56957.9 |
| amidohydrolase family protein | HMPREF1862_01140 | Not Available | + | 1233715 - 1234833 | 40932.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
