Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
495674 bp
Thymine Count
486053 bp
Guanine Count
562782 bp
Cytosine Count
551080 bp
Genome Length
2095589 bp
Protein-coding Genes
1942 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Major tail protein | HMPREF1862_00002 | Not Available | + | 316 - 924 | 21389.1 |
| Hypothetical protein | HMPREF1862_00003 | Not Available | + | 940 - 1368 | 15564.5 |
| Xre family transcriptional regulator | HMPREF1862_00004 | Not Available | - | 1559 - 1756 | 7295.83 |
| hypothetical protein | HMPREF1862_00005 | Not Available | - | 1760 - 2212 | 15828.5 |
| Tapemeasure protein | HMPREF1862_00006 | Not Available | + | 2307 - 4985 | 92816.2 |
| Trna-lys; | Not Available | Not Available | + | 2800 - 2875 | Not Available |
| Trna-arg; | Not Available | Not Available | + | 4768 - 4843 | Not Available |
| Distal tail protein | HMPREF1862_00007 | Not Available | + | 4990 - 5676 | 24278.5 |
| Trna-asn; | Not Available | Not Available | + | 5086 - 5157 | Not Available |
| rrna,type:5s | Not Available | Not Available | + | 5302 - 5418 | 18.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
