Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sulphurea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis sulphurea str. DSM 46092
Accession NumberPDJK00000000.1
Gene Summary
Adenine Count
1043305 bp
Thymine Count
1054368 bp
Guanine Count
2395033 bp
Cytosine Count
2363584 bp
Genome Length
6856290 bp
Protein-coding Genes
5941 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| squalene-associated fad-dependent desaturase | ATK36_0398 | Not Available | - | 429229 - 430581 | 47487.9 |
| hypothetical protein | ATK36_0399 | Not Available | - | 430578 - 430682 | 3309.84 |
| farnesyl-diphosphate farnesyltransferase | ATK36_0400 | Not Available | - | 430679 - 431539 | 31353.5 |
| squalene synthase hpnc | ATK36_0401 | Not Available | - | 431536 - 432408 | 31485.5 |
| pucr-like helix-turn-helix protein | ATK36_0402 | Not Available | + | 432561 - 433778 | 44296.9 |
| short-subunit dehydrogenase | ATK36_0403 | Not Available | - | 433871 - 434620 | 25934.6 |
| uncharacterized protein duf3159 | ATK36_0404 | Not Available | - | 434620 - 435285 | 23897.1 |
| hypothetical protein | ATK36_0405 | Not Available | + | 435396 - 436373 | 32915.1 |
| udp-n-acetylglucosamine:lps n-acetylglucosamine transferase | ATK36_0406 | Not Available | + | 436506 - 438881 | 85432.6 |
| peptide-methionine (s)-s-oxide reductase | ATK36_0407 | Not Available | - | 439063 - 439569 | 18974.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.