Shigella flexneri 2a

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella flexneri 2a is a Gram-negative, rod-shaped bacterium that typically exists in pairs or singles and is characterized as a nonsporulating organism. This microbe thrives optimally at a temperature of 37.0 °C, which corresponds to the average human body temperature, suggesting its adaptation to a host-associated habitat. As a chemoorganotroph, S. flexneri 2a derives its energy from organic compounds, allowing it to metabolize a variety of substrates available within its host environment. Being facultative, this bacterium can grow in both aerobic and anaerobic conditions, which further enhances its survival and adaptability in various host tissues. The ability to thrive in diverse oxygen levels may allow S. flexneri 2a to exploit different niches within the host, potentially contributing to its persistence in the gastrointestinal tract. Overall, the combination of its specific traits indicates that S. flexneri 2a has evolved to effectively occupy a niche that is closely linked to human hosts, relying on both the temperature and the organic substrates found within them for its metabolic processes. This adaptation underscores the intricate relationships that exist between pathogens and their hosts, as well as the potential for such microbes to exploit the host's physiological conditions for survival.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella flexneri
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Shigella flexneri 2a
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs-Singles
SporulationNonsporulating
Energy source Chemoorganotroph
PathogenicityNot Available

Genome Summary

Shigella flexneri 2a

Accession NumberUDPU00000000.1

Gene Summary

Adenine Count

1114663 bp

Thymine Count

1116083 bp

Guanine Count

1141259 bp

Cytosine Count

1142386 bp

Genome Length

4514512 bp

Protein-coding Genes

4322 genes

Non-Coding Genes

193 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
deoxyguanosinetriphosphate triphosphohydrolaseSAMEA3891773_00752Not Available-721665 - 72318259358.2
5'-methylthioadenosine/s-adenosylhomocysteine nucleosidaseSAMEA3891773_00753Not Available+723266 - 72396424355.4
vitamin b12-binding protein precursorSAMEA3891773_00754Not Available+723957 - 72475729396.5
inner membrane protein yicgSAMEA3891773_00755Not Available+724795 - 72541822321.3
iron-sulfur cluster insertion protein erpaSAMEA3891773_00756Not Available-725465 - 72580912101.2
chloride channel proteinSAMEA3891773_00757Not Available-725891 - 72731250339.9
glutamate-1-semialdehyde aminotransferaseSAMEA3891773_00758Not Available+727537 - 72881745354.8
iron-hydroxamate transporter permease subunitSAMEA3891773_00759Not Available-728852 - 73083470506.6
iron-hydroxamate transporter substrate-binding subunitSAMEA3891773_00760Not Available-730831 - 73172133029.2
ferrichrome transport atp-binding protein fhucSAMEA3891773_00761Not Available-731721 - 73251828902.2

Displaying genes 821 – 830 of 4515 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites