Shigella flexneri 2a

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella flexneri 2a is a Gram-negative, rod-shaped bacterium that typically exists in pairs or singles and is characterized as a nonsporulating organism. This microbe thrives optimally at a temperature of 37.0 °C, which corresponds to the average human body temperature, suggesting its adaptation to a host-associated habitat. As a chemoorganotroph, S. flexneri 2a derives its energy from organic compounds, allowing it to metabolize a variety of substrates available within its host environment. Being facultative, this bacterium can grow in both aerobic and anaerobic conditions, which further enhances its survival and adaptability in various host tissues. The ability to thrive in diverse oxygen levels may allow S. flexneri 2a to exploit different niches within the host, potentially contributing to its persistence in the gastrointestinal tract. Overall, the combination of its specific traits indicates that S. flexneri 2a has evolved to effectively occupy a niche that is closely linked to human hosts, relying on both the temperature and the organic substrates found within them for its metabolic processes. This adaptation underscores the intricate relationships that exist between pathogens and their hosts, as well as the potential for such microbes to exploit the host's physiological conditions for survival.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella flexneri
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Shigella flexneri 2a
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs-Singles
SporulationNonsporulating
Energy source Chemoorganotroph
PathogenicityNot Available

Genome Summary

Shigella flexneri 2a

Accession NumberUDPU00000000.1

Gene Summary

Adenine Count

1114663 bp

Thymine Count

1116083 bp

Guanine Count

1141259 bp

Cytosine Count

1142386 bp

Genome Length

4514512 bp

Protein-coding Genes

4322 genes

Non-Coding Genes

193 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
adenylate cyclaseSAMEA3891773_04005Not Available-3944637 - 394718397589.3
porphobilinogen deaminaseSAMEA3891773_04006Not Available+3947549 - 394851134592.9
uroporphyrinogen-iii synthaseSAMEA3891773_04007Not Available+3948508 - 394924827829.6
putative uroporphyrinogen iii c-methyltransferaseSAMEA3891773_04008Not Available+3949270 - 395048143808.3
putative protoheme ix biogenesis proteinSAMEA3891773_04009Not Available+3950484 - 395168045247.7
is600 orf1SAMEA3891773_04012Not Available-3952627 - 395292911340.6
dna transport proteinSAMEA3891773_04013Not Available+3952968 - 39531537212.25
plasmid maintenance proteinSAMEA3891773_04014Not Available-3953162 - 395356014818.0
plasmid maintenance proteinSAMEA3891773_04015Not Available-3953560 - 39537878566.08
orit nicking and unwinding proteinSAMEA3891773_04016Not Available+3953869 - 395424013351.7

Displaying genes 3901 – 3910 of 4515 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites