Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YE282 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces; rectal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YE282
Accession NumberFMUV00000000.1
Gene Summary
Adenine Count
782033 bp
Thymine Count
763411 bp
Guanine Count
509700 bp
Cytosine Count
484338 bp
Genome Length
2539482 bp
Protein-coding Genes
2444 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | SAMN02910441_00718 | Not Available | + | 713389 - 713718 | 12162.4 |
| rna polymerase sigma factor, sigma-70 family | SAMN02910441_00719 | Not Available | - | 713857 - 714153 | 11146.6 |
| hypothetical protein | SAMN02910441_00720 | Not Available | - | 714153 - 714365 | 8464.32 |
| putative efflux protein, mate family | SAMN02910441_00721 | Not Available | + | 714768 - 716174 | 50842.9 |
| 23s rrna pseudouridine955/2504/2580 synthase | SAMN02910441_00722 | Not Available | - | 716584 - 717540 | 37124.0 |
| protein of unknown function | SAMN02910441_00723 | Not Available | + | 718263 - 719792 | 56676.7 |
| stage iv sporulation protein a | SAMN02910441_00724 | Not Available | + | 719805 - 721283 | 56059.4 |
| sodium pump decarboxylases, gamma subunit | SAMN02910441_00725 | Not Available | + | 721432 - 721875 | 15505.9 |
| oxaloacetate decarboxylase, beta subunit | SAMN02910441_00726 | Not Available | + | 721896 - 723131 | 43394.7 |
| capsular polysaccharide biosynthesis protein | SAMN02910441_00727 | Not Available | + | 723344 - 724144 | 29044.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
