Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YE282 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces; rectal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YE282
Accession NumberFMUV00000000.1
Gene Summary
Adenine Count
782033 bp
Thymine Count
763411 bp
Guanine Count
509700 bp
Cytosine Count
484338 bp
Genome Length
2539482 bp
Protein-coding Genes
2444 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane-anchored protein yitt, contains duf161 and duf2179 domains | SAMN02910441_02148 | Not Available | + | 2167629 - 2168501 | 30920.5 |
| putative efflux protein, mate family | SAMN02910441_02149 | Not Available | - | 2168713 - 2170035 | 48980.9 |
| hypothetical protein | SAMN02910441_02150 | Not Available | - | 2170324 - 2171151 | 32589.3 |
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN02910441_02151 | Not Available | - | 2171177 - 2172211 | 38450.4 |
| alpha-amylase | SAMN02910441_02152 | Not Available | + | 2172411 - 2174408 | 74317.7 |
| sseb protein n-terminal domain-containing protein | SAMN02910441_02153 | Not Available | + | 2174426 - 2175247 | 30692.1 |
| hypothetical protein | SAMN02910441_02154 | Not Available | + | 2175308 - 2176123 | 31537.8 |
| transcriptional regulator, tetr family | SAMN02910441_02155 | Not Available | + | 2176280 - 2176897 | 23644.4 |
| hypothetical protein | SAMN02910441_02156 | Not Available | + | 2176986 - 2177193 | 8404.15 |
| homeodomain-like domain-containing protein | SAMN02910441_02157 | Not Available | - | 2177194 - 2177468 | 10893.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
